IQ-TREE multicore version 1.6.12 for Linux 64-bit built Aug 15 2019
Developed by Bui Quang Minh, Nguyen Lam Tung, Olga Chernomor,
Heiko Schmidt, Dominik Schrempf, Michael Woodhams.

Host:    fermat (AVX2, FMA3, 1009 GB RAM)
Command: ../../iqtree -s Pettalidae_COI.mafft.fasta -m TEST -bb 1000 -alrt 1000
Seed:    401091 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Fri Aug 19 21:46:15 2022
Kernel:  AVX+FMA - 1 threads (128 CPU cores detected)

HINT: Use -nt option to specify number of threads because your CPU has 128 cores!
HINT: -nt AUTO will automatically determine the best number of threads to use.

Reading alignment file Pettalidae_COI.mafft.fasta ... Fasta format detected
Alignment most likely contains DNA/RNA sequences
Alignment has 113 sequences with 657 columns, 487 distinct patterns
404 parsimony-informative, 57 singleton sites, 196 constant sites
                                           Gap/Ambiguity  Composition  p-value
   1  Limulus_polyphemus                           0.00%    failed      0.13%
   2  Metasiro_savannahensis_MCZ_133799            5.02%    passed     63.09%
   3  Aoraki_crypta_MCZ-134654                     1.67%    passed     32.85%
   4  Aoraki_granulosa_MCZ-134684                  0.00%    passed     84.09%
   5  Aoraki_tumidata_MCZ-133838                   0.00%    passed     84.74%
   6  Aoraki_healyi_MCZ-134638                     0.30%    passed     52.36%
   7  Aoraki_westlandica_MCZ-134653                1.22%    passed     27.26%
   8  Aoraki_denticulata_denticulata_MCZ-134642    4.41%    passed     98.32%
   9  Aoraki_denticulata_denticulata_MCZ-134659    4.57%    passed     86.86%
  10  Aoraki_denticulata_major_MCZ-133836          4.57%    passed     49.58%
  11  Aoraki_denticulata_major_MCZ-134644          4.41%    passed     46.46%
  12  Aoraki_longitarsa_MCZ-_35669                 3.04%    passed     44.11%
  13  Aoraki_denticulata_major_MCZ-35669           0.00%    passed      8.95%
  14  Aoraki_longitarsa_MCZ-35660                  0.00%    passed      8.95%
  15  Aoraki_longitarsa_CMNZ                       0.00%    passed     11.23%
  16  Aoraki_longitarsa_MCZ-134656_1               4.41%    passed     18.58%
  17  Aoraki_longitarsa_MCZ-134656_2               0.00%    passed     15.17%
  18  Archaeopurcellia_eureka_MCZ_162243           7.91%    passed     14.18%
  19  Purcellia_argasiformis_MCZ-134759            0.00%    passed      5.64%
  20  Purcellia_argasiformis_MCZ-134762            0.61%    passed      5.41%
  21  Purcellia_illustrans_MCZ-60635               0.30%    passed     27.29%
  22  Purcellia_illustrans_MCZ-134753              0.00%    passed     29.58%
  23  Purcellia_illustrans_MCZ-134754              0.00%    passed     20.85%
  24  Purcellia_illustrans_128896                  0.00%    passed     34.11%
  25  Purcellia_leleupi_MCZ-129098                 0.00%    passed     58.65%
  26  Purcellia_sp_MCZ_128897                      0.00%    passed     17.00%
  27  Purcellia_sp_MCZ_129494                      0.61%    passed     48.27%
  28  Purcellia_griswoldi_MCZ-134756               0.00%    passed     22.88%
  29  Purcellia_griswoldi_MCZ_128898               0.00%    passed     57.27%
  30  Purcellia_sp_MCZ_129493                      0.00%    passed      9.57%
  31  Chileogovea_jocasta_MCZ-134713              19.63%    passed     52.15%
  32  Chileogovea_jocasta_MCZ-134714               0.00%    passed     38.05%
  33  Chileogovea_jocasta_MCZ-134715               0.00%    passed     29.20%
  34  Chileogovea_oedipus_MCZ-134709               0.00%    passed     58.57%
  35  Chileogovea_oedipus_MCZ-134710               0.00%    passed     58.39%
  36  Chileogovea_oedipus_MCZ-134711               0.00%    passed     58.57%
  37  Chileogovea_oedipus_MCZ-134712               0.00%    passed     68.10%
  38  Karripurcellia_harveyi_MCZ-132345            0.15%    passed     91.58%
  39  Karripurcellia_peckorum_MCZ-134725           0.00%    passed     90.56%
  40  Karripurcellia_peckorum_MCZ-134726           0.00%    passed     88.60%
  41  Karripurcellia_peckorum_MCZ-134719           0.00%    passed     91.14%
  42  Karripurcellia_peckorum_MCZ-134720           0.00%    passed     94.55%
  43  Karripurcellia_peckorum_MCZ-134721           0.00%    passed     94.55%
  44  Neopurcellia_salmoni_MCZ-134739              0.00%    passed     88.84%
  45  Neopurcellia_salmoni_MCZ-133839              0.00%    passed     91.34%
  46  Neopurcellia_salmoni_MCZ-29317               0.00%    passed     94.04%
  47  Neopurcellia_salmoni_MCZ-134741              0.00%    passed     78.05%
  48  Pettalus_sp_MCZ-132356                       0.00%    passed     66.25%
  49  Pettalus_sp_MCZ-132353                       0.00%    passed     41.53%
  50  Pettalus_thwaitesi_MCZ-132348                0.46%    passed     24.01%
  51  Pettalus_sp_MCZ-132357                       0.00%    passed     93.04%
  52  Pettalus_sp_MCZ-132354                       0.00%    passed     37.40%
  53  Pettalus_sp_MCZ-132359                       0.00%    passed     52.15%
  54  Pettalus_sp_MCZ-132360                       0.00%    passed     71.35%
  55  Pettalus_sp_MCZ-134967                       0.15%    passed     50.77%
  56  Rakaia_antipodiana_MCZ-134580                0.00%    passed      6.93%
  57  Rakaia_australis_MCZ-134592                  4.41%    passed     81.34%
  58  Rakaia_media_MCZ-134581                      0.00%    passed     98.68%
  59  Rakaia_sp_MCZ-100753                         0.00%    passed     95.78%
  60  Rakaia_media_MCZ-134605                      0.00%    passed     89.21%
  61  Rakaia_sp_MCZ-133849                         0.00%    passed     94.57%
  62  Rakaia_solitaria_MCZ-134585                  0.00%    passed     67.07%
  63  Rakaia_sp_MCZ-134575                         4.41%    passed     84.30%
  64  Rakaia_dorothea_MCZ-134577                   4.41%    passed     95.95%
  65  Rakaia_sp_MCZ-133847                         4.41%    passed     74.39%
  66  Rakaia_sp_MCZ-134584                         4.41%    passed     91.44%
  67  Rakaia_sp_MCZ-129614                         0.00%    passed     87.92%
  68  Rakaia_sp_MCZ-129612                         0.00%    passed     97.12%
  69  Rakaia_collaris_MCZ-134574                   5.18%    passed     66.62%
  70  Rakaia_macra_MCZ-134582                      0.00%    passed     59.78%
  71  Rakaia_sp_MCZ-35668                          0.00%    passed     53.79%
  72  Rakaia_pauli_MCZ-134576                     57.08%    passed     99.11%
  73  Rakaia_uniloca_MCZ-134583                    3.20%    passed     93.35%
  74  Rakaia_digitata_MCZ-134571                  16.13%    passed     85.43%
  75  Rakaia_sp_MCZ-35662                          0.00%    passed     67.84%
  76  Rakaia_stewartiensis_MCZ-134599              0.30%    passed      9.71%
  77  Rakaia_sorenseni_MCZ-134567                  0.30%    passed     46.00%
  78  Rakaia_florensis_MCZ-134588                  0.00%    passed     65.91%
  79  Rakaia_minutissima_MCZ-134591                0.00%    passed     95.48%
  80  Rakaia_minutissima_MCZ-29280                 0.15%    passed     59.48%
  81  Parapurcellia_convexa_MCZ-128902             0.00%    passed     57.12%
  82  Parapurcellia_convexa_MCZ-134744             0.00%    passed     74.03%
  83  Parapurcellia_fissa_MCZ-134745               0.00%    passed     14.54%
  84  Parapurcellia_monticola_MCZ-60357_1          0.61%    failed      3.45%
  85  Parapurcellia_monticola_MCZ-60357_2          0.76%    failed      3.59%
  86  Parapurcellia_minuta_MCZ-134747              0.46%    passed     10.67%
  87  Parapurcellia_silvicola_MCZ-134742_1         0.00%    passed     38.49%
  88  Parapurcellia_silvicola_MCZ-134742_2         0.00%    passed     44.68%
  89  Parapurcellia_staregai_MCZ-134746            0.00%    passed     56.66%
  90  Parapurcellia_sp_MCZ_128900                  0.00%    passed     59.65%
  91  Parapurcellia_peregrinator_MCZ-128901        0.00%    passed     17.65%
  92  Parapurcellia_rumpiana_MCZ-134748            0.00%    passed     31.34%
  93  Austropurcellia_arcticosa_MCZ_132325         2.59%    failed      0.42%
  94  Austropurcellia_giribeti_MCZ-132337          0.00%    failed      0.02%
  95  Austropurcellia_giribeti_MCZ-134696          0.00%    failed      0.48%
  96  Austropurcellia_cadens_CASENT9035046         0.15%    passed     16.80%
  97  Austropurcellia_despectata_MCZ-132324        0.00%    failed      0.74%
  98  Austropurcellia_tholei_MCZ-134697            0.00%    passed      6.21%
  99  Austropurcellia_daviesae_MCZ-132323          0.00%    passed      9.76%
 100  Austropurcellia_culminis_MCZ-132322          0.00%    failed      4.55%
 101  Austropurcellia_vicina_MCZ-132318            0.00%    failed      0.04%
 102  Austropurcellia_vicina_MCZ-132334            0.30%    failed      0.00%
 103  Austropurcellia_sharmai_MCZ-134698           0.15%    passed     23.26%
 104  Austropurcellia_scoparia_MCZ-134700         38.51%    passed     46.77%
 105  Parasiro_minor_MCZ_132374                    0.00%    failed      0.00%
 106  Austropurcellia_acuta_MCZ-134701             0.00%    passed      6.35%
 107  Austropurcellia_clousei_MCZ-132339           0.00%    failed      4.33%
 108  Suzukielus_sauteri_MCZ_132256                0.00%    failed      1.22%
 109  Parasiro_coiffaiti_MCZ_132372                1.37%    failed      0.00%
 110  Siro_rubens_MCZ_132391                       0.46%    passed     61.73%
 111  Cyphophthalmus_duricorius_MCZ_135009         0.91%    failed      2.04%
 112  Paramiopsalis_ramulosus_MCZ_135006           0.46%    passed     43.11%
 113  Siro_exilis_MCZ_134551                       0.00%    failed      0.00%
WARNING: 1 sequences contain more than 50% gaps/ambiguity
****  TOTAL                                        1.90%  16 sequences failed composition chi2 test (p-value<5%; df=3)
NOTE: Aoraki_longitarsa_MCZ-35660 is identical to Aoraki_denticulata_major_MCZ-35669 but kept for subsequent analysis


Create initial parsimony tree by phylogenetic likelihood library (PLL)... 0.010 seconds
NOTE: ModelFinder requires 9 MB RAM!
ModelFinder will test 88 DNA models (sample size: 657) ...
 No. Model         -LnL         df  AIC          AICc         BIC
  1  JC            30101.152    223 60648.304    60879.029    61649.058
  2  JC+I          27992.212    224 56432.425    56665.758    57437.666
  3  JC+G4         26197.158    224 52842.316    53075.649    53847.557
  4  JC+I+G4       26121.502    225 52693.005    52928.968    53702.734
  5  F81+F         29768.463    226 59988.925    60227.539    61003.142
  6  F81+F+I       27544.606    227 55543.212    55784.498    56561.916
  7  F81+F+G4      25471.060    227 51396.120    51637.407    52414.825
  8  F81+F+I+G4    25383.646    228 51223.291    51467.273    52246.483
  9  K2P           29855.044    224 60158.088    60391.421    61163.329
 10  K2P+I         27737.797    225 55925.594    56161.557    56935.323
 11  K2P+G4        25889.191    225 52228.382    52464.345    53238.111
 12  K2P+I+G4      25809.235    226 52070.470    52309.084    53084.687
 13  HKY+F         29405.909    227 59265.819    59507.106    60284.523
 14  HKY+F+I       27097.093    228 54650.186    54894.168    55673.378
 15  HKY+F+G4      24773.304    228 50002.607    50246.588    51025.799
 16  HKY+F+I+G4    24688.552    229 49835.104    50081.802    50862.784
 17  TNe           29718.398    225 59886.796    60122.759    60896.525
 18  TNe+I         27561.277    226 55574.553    55813.167    56588.770
 19  TNe+G4        25642.396    226 51736.792    51975.406    52751.009
 20  TNe+I+G4      25559.078    227 51572.156    51813.443    52590.860
 21  TN+F          29350.754    228 59157.508    59401.489    60180.700
 22  TN+F+I        27016.189    229 54490.379    54737.077    55518.058
 23  TN+F+G4       24633.085    229 49724.170    49970.868    50751.850
 24  TN+F+I+G4     24569.706    230 49599.412    49848.849    50631.580
 25  K3P           29385.424    225 59220.849    59456.811    60230.577
 26  K3P+I         27222.094    226 54896.187    55134.801    55910.404
 27  K3P+G4        25365.949    226 51183.899    51422.513    52198.115
 28  K3P+I+G4      25287.178    227 51028.357    51269.643    52047.061
 29  K3Pu+F        29170.437    228 58796.874    59040.855    59820.066
 30  K3Pu+F+I      26893.678    229 54245.356    54492.054    55273.036
 31  K3Pu+F+G4     24701.460    229 49860.919    50107.617    50888.599
 32  K3Pu+F+I+G4   24608.709    230 49677.418    49926.855    50709.586
 33  TPM2+F        28937.455    228 58330.909    58574.890    59354.101
 34  TPM2+F+I      26751.294    229 53960.587    54207.285    54988.267
 35  TPM2+F+G4     24735.006    229 49928.012    50174.710    50955.692
 36  TPM2+F+I+G4   24639.155    230 49738.309    49987.746    50770.477
 37  TPM2u+F       28937.455    228 58330.909    58574.890    59354.101
 38  TPM2u+F+I     26751.294    229 53960.587    54207.285    54988.267
 39  TPM2u+F+G4    24735.005    229 49928.011    50174.709    50955.691
 40  TPM2u+F+I+G4  24639.154    230 49738.307    49987.744    50770.475
 41  TPM3+F        29337.276    228 59130.552    59374.534    60153.744
 42  TPM3+F+I      27049.380    229 54556.760    54803.458    55584.440
 43  TPM3+F+G4     24758.584    229 49975.168    50221.866    51002.848
 44  TPM3+F+I+G4   24670.254    230 49800.509    50049.946    50832.676
 45  TPM3u+F       29337.277    228 59130.553    59374.534    60153.745
 46  TPM3u+F+I     27049.380    229 54556.760    54803.458    55584.440
 47  TPM3u+F+G4    24758.585    229 49975.169    50221.867    51002.849
 48  TPM3u+F+I+G4  24670.235    230 49800.471    50049.908    50832.638
 49  TIMe          29245.239    226 58942.477    59181.091    59956.694
 50  TIMe+I        27039.909    227 54533.819    54775.105    55552.523
 51  TIMe+G4       25134.505    227 50723.010    50964.296    51741.714
 52  TIMe+I+G4     25047.198    228 50550.395    50794.377    51573.587
 53  TIM+F         29113.085    229 58684.171    58930.869    59711.851
 54  TIM+F+I       26807.869    230 54075.737    54325.174    55107.905
 55  TIM+F+G4      24561.733    230 49583.466    49832.903    50615.633
 56  TIM+F+I+G4    24491.045    231 49444.090    49696.288    50480.745
 57  TIM2e         28891.369    226 58234.738    58473.351    59248.954
 58  TIM2e+I       26882.783    227 54219.566    54460.853    55238.270
 59  TIM2e+G4      25209.628    227 50873.257    51114.544    51891.961
 60  TIM2e+I+G4    25138.151    228 50732.302    50976.283    51755.494
 61  TIM2+F        28895.516    229 58249.032    58495.730    59276.712
 62  TIM2+F+I      26682.120    230 53824.240    54073.677    54856.408
 63  TIM2+F+G4     24579.541    230 49619.081    49868.518    50651.248
 64  TIM2+F+I+G4   24511.325    231 49484.650    49736.847    50521.305
 65  TIM3e         29475.260    226 59402.520    59641.134    60416.736
 66  TIM3e+I       27370.629    227 55195.259    55436.546    56213.963
 67  TIM3e+G4      25475.156    227 51404.312    51645.598    52423.016
 68  TIM3e+I+G4    25396.237    228 51248.474    51492.456    52271.666
 69  TIM3+F        29278.837    229 59015.675    59262.372    60043.354
 70  TIM3+F+I      26965.152    230 54390.303    54639.740    55422.470
 71  TIM3+F+G4     24624.483    230 49708.966    49958.402    50741.133
 72  TIM3+F+I+G4   24558.548    231 49579.095    49831.293    50615.750
 73  TVMe          28719.600    227 57893.200    58134.487    58911.904
 74  TVMe+I        26765.818    228 53987.636    54231.617    55010.827
 75  TVMe+G4       25129.471    228 50714.941    50958.922    51738.133
 76  TVMe+I+G4     25068.235    229 50594.469    50841.167    51622.149
 77  TVM+F         28861.857    230 58183.714    58433.151    59215.882
 78  TVM+F+I       26691.849    231 53845.698    54097.896    54882.353
 79  TVM+F+G4      24683.154    231 49828.309    50080.507    50864.964
 80  TVM+F+I+G4    24592.074    232 49648.149    49903.130    50689.291
 81  SYM           28596.001    228 57648.002    57891.983    58671.194
 82  SYM+I         26598.027    229 53654.054    53900.752    54681.734
 83  SYM+G4        24893.970    229 50245.939    50492.637    51273.619
 84  SYM+I+G4      24827.906    230 50115.812    50365.249    51147.979
 85  GTR+F         28816.668    231 58095.336    58347.534    59131.991
 86  GTR+F+I       26619.057    232 53702.113    53957.095    54743.256
 87  GTR+F+G4      24542.680    232 49549.361    49804.342    50590.503
 88  GTR+F+I+G4    24472.561    233 49411.123    49668.910    50456.753
Akaike Information Criterion:           GTR+F+I+G4
Corrected Akaike Information Criterion: GTR+F+I+G4
Bayesian Information Criterion:         GTR+F+I+G4
Best-fit model: GTR+F+I+G4 chosen according to BIC

All model information printed to Pettalidae_COI.mafft.fasta.model.gz
CPU time for ModelFinder: 21.000 seconds (0h:0m:21s)
Wall-clock time for ModelFinder: 21.324 seconds (0h:0m:21s)
Generating 1000 samples for ultrafast bootstrap (seed: 401091)...

NOTE: 9 MB RAM (0 GB) is required!
Estimate model parameters (epsilon = 0.100)
Thoroughly optimizing +I+G parameters from 10 start values...
Init pinv, alpha: 0.000, 1.000 / Estimate: 0.000, 0.391 / LogL: -24542.527
Init pinv, alpha: 0.033, 1.000 / Estimate: 0.247, 0.568 / LogL: -24472.545
Init pinv, alpha: 0.066, 1.000 / Estimate: 0.246, 0.566 / LogL: -24472.539
Init pinv, alpha: 0.099, 1.000 / Estimate: 0.246, 0.566 / LogL: -24472.523
Init pinv, alpha: 0.133, 1.000 / Estimate: 0.247, 0.569 / LogL: -24472.552
Init pinv, alpha: 0.166, 1.000 / Estimate: 0.247, 0.570 / LogL: -24472.540
Init pinv, alpha: 0.199, 1.000 / Estimate: 0.247, 0.571 / LogL: -24472.545
Init pinv, alpha: 0.232, 1.000 / Estimate: 0.248, 0.573 / LogL: -24472.573
Init pinv, alpha: 0.265, 1.000 / Estimate: 0.248, 0.573 / LogL: -24472.571
Init pinv, alpha: 0.298, 1.000 / Estimate: 0.248, 0.573 / LogL: -24472.561
Optimal pinv,alpha: 0.246, 0.566 / LogL: -24472.523

Parameters optimization took 7.670 sec
Computing ML distances based on estimated model parameters... 0.120 sec
Computing BIONJ tree...
0.053 seconds
Log-likelihood of BIONJ tree: -24406.629
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 98 parsimony trees... 1.422 second
Computing log-likelihood of 98 initial trees ... 2.657 seconds
Current best score: -24392.664

Do NNI search on 20 best initial trees
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 1: -24328.413
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 2: -24317.957
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 8: -24306.752
Iteration 10 / LogL: -24314.189 / Time: 0h:0m:17s
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 12: -24304.590
Iteration 20 / LogL: -24317.777 / Time: 0h:0m:21s
Finish initializing candidate tree set (20)
Current best tree score: -24304.590 / CPU time: 13.899
Number of iterations: 20
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 23: -24300.735
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 25: -24299.113
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 27: -24298.961
Iteration 30 / LogL: -24350.596 / Time: 0h:0m:26s (0h:1m:30s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 34: -24298.798
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 35: -24298.464
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 39: -24295.550
Iteration 40 / LogL: -24295.732 / Time: 0h:0m:31s (0h:1m:20s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 42: -24295.152
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 46: -24293.470
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 47: -24293.005
Iteration 50 / LogL: -24294.529 / Time: 0h:0m:36s (0h:1m:12s left)
Log-likelihood cutoff on original alignment: -24373.508
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 54: -24291.978
Iteration 60 / LogL: -24361.175 / Time: 0h:0m:41s (0h:1m:5s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 68: -24291.918
Iteration 70 / LogL: -24292.067 / Time: 0h:0m:45s (0h:1m:4s left)
Iteration 80 / LogL: -24304.844 / Time: 0h:0m:49s (0h:0m:55s left)
Iteration 90 / LogL: -24299.878 / Time: 0h:0m:54s (0h:0m:47s left)
Iteration 100 / LogL: -24293.916 / Time: 0h:0m:58s (0h:0m:40s left)
Log-likelihood cutoff on original alignment: -24373.508
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 0.994
Iteration 110 / LogL: -24321.648 / Time: 0h:1m:3s (0h:0m:52s left)
Iteration 120 / LogL: -24297.977 / Time: 0h:1m:8s (0h:0m:45s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 121: -24291.866
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 125: -24291.471
BETTER TREE FOUND at iteration 127: -24291.470
Iteration 130 / LogL: -24291.850 / Time: 0h:1m:13s (0h:0m:54s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 136: -24291.381
Iteration 140 / LogL: -24293.029 / Time: 0h:1m:17s (0h:0m:53s left)
Iteration 150 / LogL: -24299.794 / Time: 0h:1m:22s (0h:0m:47s left)
Log-likelihood cutoff on original alignment: -24373.508
Iteration 160 / LogL: -24296.350 / Time: 0h:1m:27s (0h:0m:41s left)
Iteration 170 / LogL: -24537.627 / Time: 0h:1m:31s (0h:0m:35s left)
Iteration 180 / LogL: -24330.628 / Time: 0h:1m:36s (0h:0m:30s left)
Iteration 190 / LogL: -24293.102 / Time: 0h:1m:40s (0h:0m:24s left)
Iteration 200 / LogL: -24356.908 / Time: 0h:1m:44s (0h:0m:18s left)
Log-likelihood cutoff on original alignment: -24373.508
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 0.998
Iteration 210 / LogL: -24322.669 / Time: 0h:1m:49s (0h:0m:47s left)
Iteration 220 / LogL: -24327.317 / Time: 0h:1m:54s (0h:0m:41s left)
Iteration 230 / LogL: -24301.703 / Time: 0h:1m:58s (0h:0m:36s left)
TREE SEARCH COMPLETED AFTER 237 ITERATIONS / Time: 0h:2m:1s

--------------------------------------------------------------------
|                    FINALIZING TREE SEARCH                        |
--------------------------------------------------------------------
Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
1. Initial log-likelihood: -24291.381
Optimal log-likelihood: -24291.380
Rate parameters:  A-C: 1.49000  A-G: 5.47307  A-T: 4.08873  C-G: 1.88650  C-T: 15.09699  G-T: 1.00000
Base frequencies:  A: 0.289  C: 0.182  G: 0.143  T: 0.386
Proportion of invariable sites: 0.236
Gamma shape alpha: 0.538
Parameters optimization took 1 rounds (0.065 sec)
BEST SCORE FOUND : -24291.380

Testing tree branches by SH-like aLRT with 1000 replicates...
1.882 sec.
Creating bootstrap support values...
Split supports printed to NEXUS file Pettalidae_COI.mafft.fasta.splits.nex
Total tree length: 22.014

Total number of iterations: 237
CPU time used for tree search: 112.068 sec (0h:1m:52s)
Wall-clock time used for tree search: 113.307 sec (0h:1m:53s)
Total CPU time used: 122.180 sec (0h:2m:2s)
Total wall-clock time used: 123.743 sec (0h:2m:3s)

Computing bootstrap consensus tree...
Reading input file Pettalidae_COI.mafft.fasta.splits.nex...
113 taxa and 738 splits.
Consensus tree written to Pettalidae_COI.mafft.fasta.contree
Reading input trees file Pettalidae_COI.mafft.fasta.contree
Log-likelihood of consensus tree: -24291.981

Analysis results written to: 
  IQ-TREE report:                Pettalidae_COI.mafft.fasta.iqtree
  Maximum-likelihood tree:       Pettalidae_COI.mafft.fasta.treefile
  Likelihood distances:          Pettalidae_COI.mafft.fasta.mldist

Ultrafast bootstrap approximation results written to:
  Split support values:          Pettalidae_COI.mafft.fasta.splits.nex
  Consensus tree:                Pettalidae_COI.mafft.fasta.contree
  Screen log file:               Pettalidae_COI.mafft.fasta.log

Date and Time: Fri Aug 19 21:48:41 2022
